Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIRSAAASLSPCLTAVGNVRASVPPACCSKVGALIKTA-PKCLCAVLLSPLAMQAGIKPGIAITI-PKRCNIKNRPVGKKCGRYTVP
1HYP Chain:A ((10-79))
--------------DLSICLNILGGSLGT-VDDCCALIGGLGDIEAIVCLCIQLRA---LGI-LNLNRNLQLILNSCGRS-YPSNATCPR----
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38987 for 414 contacts (-94.2/contact) +
2D Compatibility (PS) -6501 + (NN) 1700 + (LL) 960
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -48078.0 ( -116.13 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: