Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VDCTTVTGLLSTCSAFITYGSPDPYPGSPCCDAVMNLNLIADSTDNRKSVCGCLMGLITTY-NPNSTAIATLPGFCGVALGFTIDPNTDCNFVPLF
2ALG Chain:A ((2-92))
ITCGQVSSSLAPCIPYVRGGG---AVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCATVK--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83118 for 624 contacts (-133.2/contact) +
2D Compatibility (PS) -9235 + (NN) -2822 + (LL) -48
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -102223.0 ( -163.82 by residue)
QMean score : 0.147
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: