Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DVNQDKTECANQL---VGLASCLPYVGGQSK------------TPTIDCCSGLKQVLDKSRKCLCVLIKDRDDPSL-GL--KINATLAATLPSTCHAPVNMTECI
1S6D Chain:A ((10-98))
-------GCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNL---DEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMS------
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44258 for 496 contacts (-89.2/contact) +
2D Compatibility (PS) -7327 + (NN) -1366 + (LL) 904
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -56897.0 ( -114.71 by residue)
QMean score : 0.207
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: