Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SEVPTSRGGMSPTQCKEKQRLLVNACSAVMF-GHSPSSDCCKHVRLT-QVQ---CVCPAITSKLAGLVGVEHTIK-QIESCGRTVPRNFKCGI
1HYP Chain:A ((13-78))
------------------------ICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRA--LGILNLNRNLQLILNSCGRSYPSNATCP-
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37512 for 348 contacts (-107.8/contact) +
2D Compatibility (PS) -6052 + (NN) -93 + (LL) 1536
1D Compatibility (HY) -6400 + (ID) 700
Total energy: -49221.0 ( -141.44 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: