Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATAQCRSLTEYSPCLDAVTTGAEPTDQCCETLAGVMSMDDGLACLCDALTSDAAS---S---LG-----IRTSDAVQLPSKCQAKTGLTYTHGYNCKGATVP
2DS2 Chain:B ((7-62))
------------------------LRQCCNQLRQV-----DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIP-----------------
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14049 for 228 contacts (-61.6/contact) +
2D Compatibility (PS) -4688 + (NN) -388 + (LL) 1944
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -20281.0 ( -88.95 by residue)
QMean score : 0.278
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: