Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EGCDNDRQDMIRECAKYQKFPKEPKKDPSKACCAVWQKA-DFP---CLCKDVTK----ELE-KVAYVAKFCKWPFPSGYKCGSYTFPLGQ
1HYP Chain:A ((25-79))
----------------------------VDDCCALIGGLGDIEAIVCLCIQLRALGILNLNRNLQLILNSCGRSYPSNATCPR-------
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23798 for 230 contacts (-103.5/contact) +
2D Compatibility (PS) -4917 + (NN) -5755 + (LL) 1248
1D Compatibility (HY) -5200 + (ID) 600
Total energy: -39022.0 ( -169.66 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: