Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTTCDNNINGILSNCKSTNPSPACCSFMRKI-TLE---CVCPRITSDVTKYISLSSILT-IAKICHRTLPHQYQCGSYLLP
1HYP Chain:A ((25-79))
--------------------VDDCCALIGGLGDIEAIVCLCIQLRA-L-GILNLNRNLQLILNSCGRSYPSNATCPR----
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38336 for 253 contacts (-151.5/contact) +
2D Compatibility (PS) -4936 + (NN) 624 + (LL) 276
1D Compatibility (HY) -6400 + (ID) 600
Total energy: -49372.0 ( -195.15 by residue)
QMean score : 0.249
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: