Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DDDATLDCDSQVNGLAGNCMTAVLIGTKPSSKCCKFVRSAQLDCLCSKITKDVTKMITE-----------------HL-L-NTALKI--AKQCNWELPHNYQCGSYTFP
1BEA Chain:A ((41-112))
-----------------------------KRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISGV--------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21042 for 254 contacts (-82.8/contact) +
2D Compatibility (PS) -5173 + (NN) -1197 + (LL) 1096
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -28316.0 ( -111.48 by residue)
QMean score : 0.258
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: