Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DDDTTLDCDSQVNGLVGNCMTAVLIGTKPSSKCCKFVRAA-QP---DCVCPKITGDVTKVLKLSTAL-KIAKRCNRELPHNYQCGSYTLP
1HYP Chain:A ((25-79))
-----------------------------VDDCCALIGGLGDIEAIVCLCIQLRA--LGILNLNRNLQLILNSCGRSYPSNATCPR----
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22782 for 253 contacts (-90.0/contact) +
2D Compatibility (PS) -4956 + (NN) -397 + (LL) 1236
1D Compatibility (HY) -6000 + (ID) 650
Total energy: -33549.0 ( -132.60 by residue)
QMean score : 0.348
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: