Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCTFESTLPDLADCRPYVSTGST---QT-------DPTAACCSELRNVGHSCLCDLLRDT--K-V-PS--DIDINRAVALPGKCSLPGADSCS
1S6D Chain:A ((19-102))
---------EMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQ-PCQ
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29150 for 439 contacts (-66.4/contact) +
2D Compatibility (PS) -7111 + (NN) -2465 + (LL) 664
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -44962.0 ( -102.42 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: