Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DPDQQPPCNTFMSVLSCQSATMSESTMPSPACCAALRKFHD---ADCLCQVLLSARSAAAIANVPFNLKAALEIP-MKCALRTVSAPPGYSCGGMVVPRSPPPTST
1HYP Chain:A ((10-78))
------------DLSICLNILGGSLGT-VDDCCALIGGLGDIEAIVCLCIQLR-------ALGI-LNLNRNLQLILNSCGR---SYPSNATCP-------------
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52912 for 400 contacts (-132.3/contact) +
2D Compatibility (PS) -6972 + (NN) -4013 + (LL) 728
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -67169.0 ( -167.92 by residue)
QMean score : 0.254
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: