Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------DTSPSQCKEERNLLVNACRPVIYGRSPSADCCQRV-------------RVSHVECVCPYVTPK------TAAIIGVIGVD--NVVKKIEGCGRTVPRKFKCGSITTP----
1IVW Chain:A ((97-209))
ELPVLEEEFEVVEQLLATD-ERWLKALAA--RNLDVSKVRVAPLSAGVFEYAEERGRRILRGLAFVQDFPEDSAWAHPVDGLVAYVDVVSKEVTRVIDTGVFPVPA--EHGNYTDPELTG
General information:
TITO was launched using:
RESULT:
Template:
1IVW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22857 for 512 contacts (-44.6/contact) +
2D Compatibility (PS) -8790 + (NN) -5342 + (LL) 692
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -40847.0 ( -79.78 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_1IVW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IVW-query.scw
PDB file :
Tito_Scwrl_1IVW.pdb
: