Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APSAAECKEETRLAIKACKPVVYG-MDPSPACCERARVTHVECVCPLIT-PKLAALIDVNKAVRIIEGCGRKVPRHYKCGSITTP
1L6H Chain:A ((8-69))
--------------LTVCTGAIAGGARPTAACCSSLRAQ-QGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP---TCH-----
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30222 for 410 contacts (-73.7/contact) +
2D Compatibility (PS) -5977 + (NN) 312 + (LL) 1588
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -37849.0 ( -92.31 by residue)
QMean score : 0.148
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: