Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DQVCKGDFGSLVEQCLQYVQKPGPKTPPSEGCCNAINTV-DI---PCVCQHLPPVVGDIVSLEKVAF-VLRACGKPLEPGTKCGNYTVPPAV
1HYP Chain:A ((25-79))
----------------------------VDDCCALIGGLGDIEAIVCLCIQLRA-LGI-LNLNRNLQLILNSCGRSYPSNATCPR-------
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21289 for 255 contacts (-83.5/contact) +
2D Compatibility (PS) -5269 + (NN) -3231 + (LL) 1624
1D Compatibility (HY) -6000 + (ID) 700
Total energy: -34865.0 ( -136.73 by residue)
QMean score : 0.291
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: