Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTICNMSGEGLMACKPAVSPPNPAPPSAACCSALSHADMHCLCSYRNSKLLP------SMG-----IDPNLALQLPKKCKFPNAAHC
2DS2 Chain:B ((7-67))
--------------------------LRQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGAC
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19220 for 283 contacts (-67.9/contact) +
2D Compatibility (PS) -5156 + (NN) -1432 + (LL) 472
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -27636.0 ( -97.65 by residue)
QMean score : 0.249
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: