Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EEKAACVVTDLKACLPDI--IGETPPSTKCCTKLKDK-----KSCFCEYLKNPLIAPYMTS---AKQVLEACGVPVPVCQRF
1HYP Chain:A ((7-73))
----SCP--DLSICLNILGGSLGT--VDDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPS----
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32441 for 343 contacts (-94.6/contact) +
2D Compatibility (PS) -5806 + (NN) -3481 + (LL) 916
1D Compatibility (HY) -5200 + (ID) 750
Total energy: -46762.0 ( -136.33 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: