Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKEESELARIKSSKAVVSKTIKEGKQGRKIPIWLMRQAGRSLPEYR--RAVKDTSSFMEICYNTDLVVELTLQPVARFSMDAAIIFSDILIVADVLGCDVDFIRGVGPT----IKPVKNFKELRNPQKIETKTLPILNAIRKVRDKLPEEKSLIGFAGGPWTVASYIIEGRSSKTFSKV---LNLHPSSLEQIIEQITEVTISYLVKQIEFGADVIQLFDSNAGVLSGELFEECVIKPTKKIVSAIKGKFPD-----FPIIGFPKSAGSLYKDYCEKTGVSAVSIDYNVPIEWAKENL--KIPLQGNLNPSLLAYNKMEAIKETKRIIDCFRDLPFIFNLGHGVLPNTPIENIAALVDLVKSQ
1JPK Chain:A ((25-360))-----------------------GEETDYTPVWCMRQAGRYLPEFRETRAAQD---FFSTCRSPEACCELTLQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFADAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKD-GHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKH


General information:
TITO was launched using:
RESULT:

Template: 1JPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -218843 for 2741 contacts (-79.8/contact) +
2D Compatibility (PS) -33729 + (NN) -6889 + (LL) 2380
1D Compatibility (HY) -24400 + (ID) 5850
Total energy: -287331.0 ( -104.83 by residue)
QMean score : 0.557

(partial model without unconserved sides chains):
PDB file : Tito_1JPK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JPK-query.scw
PDB file : Tito_Scwrl_1JPK.pdb: