Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------MEFLNTHPKKKEIVAEFNNEHYINESDLKTLEE----------------GKDLVDKINNINLIQQNEESEELNIGKVLA
1R7J Chain:A ((3-92))
KKSKLEIIQAILEACKSGSPKTRIMYGANLSYALTGRYIKMLMDLEIIRQEGKQYMLTKKGEELLEDIRKFNEMRKNMDQLKEKINSVLS
General information:
TITO was launched using:
RESULT:
Template:
1R7J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6403 for 302 contacts (21.2/contact) +
2D Compatibility (PS) -6759 + (NN) -2385 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -7441.0 ( -24.64 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_1R7J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R7J-query.scw
PDB file :
Tito_Scwrl_1R7J.pdb
: