Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILLELQFYLSLPHIFSYQQMHKNEEISEAKTSRNAEEVKEIVKTQLEGLKQLKKQLKQKLGV
1Z0J Chain:B ((23-54))
-------------------------AYIFDAKQCGRLDEVE-VLTENLRELKHTLAKQKGGTD-
General information:
TITO was launched using:
RESULT:
Template:
1Z0J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7719 for 139 contacts (55.5/contact) +
2D Compatibility (PS) -3564 + (NN) -3289 + (LL) 2632
1D Compatibility (HY) -1600 + (ID) 400
Total energy: 1498.0 ( 10.78 by residue)
QMean score : 0.667
(partial model without unconserved sides chains):
PDB file :
Tito_1Z0J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z0J-query.scw
PDB file :
Tito_Scwrl_1Z0J.pdb
: