Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFLKVFKSIFLFLVSILFVCPILSLVSILFTESTNSEWVI-STL----FPEYILNTLILMIGVGSISFIFGVIPAWLTTFFSFPGSRIFEVALFFPISIPGYIISFVYVNSLEF-SGPTQSLLREIFHWGKGDYWFPE-IKSLGGGILVMGFSLYTYVYILVRSNLKNVS-NSVTVASTLGFSSLQSLFSVVIPSIRPSIIAGISLVLMEVITDFGTPQFLAI--D-------------TFTTGIYRTWFL---LHDKYSAAVLAVAELVFITALIAVEKILQKKEISYSAINTNSDYHNKRSISGAIPLVFAYAMCILPILVGFALPIIPLIYWSIEKGFFIYGARFYNIIANSIGLSFITAMISVSIAIMIGCTARKNKVINNIARLISLGYAIPNAVIAISIIIFLSKISSFITQYFTEISLVGTVGALIYSYLFRFFAISFKAIESGLKKTPNEIEWIAYTMGHGPISTCLNIHIPLIKKSILSGFLLVFMDTIKELTATLIIRPFNFETISTRIYELVSDERYREAAPFSLMIVITGLISTIILFKLDDENKK |
| 3RLF Chain:F ((262-503)) | ---------------------------------KNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVK--PAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155695 for 1468 contacts (-106.1/contact) +
2D Compatibility (PS) -21418 + (NN) 2040 + (LL) 28108
1D Compatibility (HY) -17600 + (ID) 2100
Total energy: -166665.0 ( -113.53 by residue)
QMean score : 0.195
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