Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MSNKIGFLAVFALVISSQIGSGIFMLPISLAPYS-TYSLISWAISGFGAVSLALVFATLCAKFPETGGPHVYVKHAFGP-TAAFFVGWTYWVISWVSTTALIVVGVGYLTPFLHEEI-KNIHLFLELLLFTIITLINLRGVATAGRVEFLLTVIKIAVLLAIPVMALFFFNRNNFIISKEMSSLTISQILARSTLLTLWCFVGVELATAPAGSVNNPAKTIPRAVVLGTICVAIIYFINNFAIMGLINGNDLA-NSRAPYVDAIKIMFSGNWHLIISIVAFVFCVGSLNAWVLSSGQVAFGLAKDRLMPQLFAKRNEHGSPFWGITTSSSGTAILLILTSNNNFAQQITSIIDFSVVSFLFVYLACSLAFLKVVIK----ERNYHKLLTGSIATTFCCWVILETSINTLLIASLFTTSGIPLYLFWYRRASAQ----------
3GIA Chain:A ((3-435))LKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYV--IPDLAPSAVSGMIFASAIF-FLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFN--------MEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKS


General information:
TITO was launched using:
RESULT:

Template: 3GIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -443938 for 3826 contacts (-116.0/contact) +
2D Compatibility (PS) -41484 + (NN) -1406 + (LL) 708
1D Compatibility (HY) -34800 + (ID) 3950
Total energy: -524870.0 ( -137.19 by residue)
QMean score : 0.347

(partial model without unconserved sides chains):
PDB file : Tito_3GIA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GIA-query.scw
PDB file : Tito_Scwrl_3GIA.pdb: