Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVVEIVIRNSTYKISCESGKKDHLLHLANSFNKLVSSISHKTGGKGSDTLNFLLAALILEDKVLELTKKLDEINQKRENYKNEKRTEYTEVLDRVNKIIECIKD
1T3Q Chain:A ((10-37))
-MRISATINGKPRVFYVEPR--MHLADALREVVGLTGTKIGCEQGVCGSCTILIDGAPMRSCLTLAVQAEGCSIETVEGLSQGEKLNALQDSFRRHHALQCGFCT
General information:
TITO was launched using:
RESULT:
Template:
1T3Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11228 for 126 contacts (-89.1/contact) +
2D Compatibility (PS) -3274 + (NN) -1144 + (LL) 336
1D Compatibility (HY) 400 + (ID) 200
Total energy: -15110.0 ( -119.92 by residue)
QMean score : 0.627
(partial model without unconserved sides chains):
PDB file :
Tito_1T3Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T3Q-query.scw
PDB file :
Tito_Scwrl_1T3Q.pdb
: