Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLSPAIFSIGPVSIHWYSLAYVLGIVFAYWHLHKLDEQKIFTKNFYDSLLTATIIGIILGGRLGFVLIYDPISYINNPIEILKTWKGGMSFHGGAIGVLCAVIISCRRYNIPIFYTLDLISCGVPIGLFLGRIGNFVNGELFGRVTTMPWGMVFPESGDNLLRHPSQLYEAFFEGLLFFAIANSLFFLTRIRLYHGTLTGIAVIWYGTVRFVVEFFREPDYQVGYLWLDLTMGQLLSIF--MTLLGIIVYLSALNSKFNTKSVA- |
1RQT Chain:A ((1-37)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1RQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -9900 for 134 contacts (-73.9/contact) +
2D Compatibility (PS) -3478 + (NN) -1210 + (LL) 16684
1D Compatibility (HY) -3600 + (ID) 400
Total energy: -1904.0 ( -14.21 by residue)
QMean score : 0.164
|
|
|