Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAHIPVLLKEML------LQLSPQNGGIYVDATFGAGGYSKAILE--SADCKVYAID-RDKTVIKFYEDLNIKYPSRVKLFIEKFSNIRSILDSNSLEYLVEPSAVSKLSSIISSGIQKKNIWISASSTGVTPSNTVDGVVFDIGVSSMQLDDGDRGFSFLHDGPLDMRMDNSSHTNASTFVNALREEEIANTIYNYGGERHSRRIARAIVNARKKKTIKTTFELANIVRSVVFRGKSKIDPATRTFQAIRIWVNDELGELEKGIKAASEILNKNGKLIVVTFHSLEDRIVKTFFKSLCEPRSIDCKVFSLLNKKMIKASAEEVNANPRSRSAKLRAIQRLS |
| 4POO Chain:B ((6-82)) | ----PMILKKILPYSKELLKMAAGEGDIVIDATMGNGHDTQFLAELVGENGHVYAFDIQESAVANTKERLGEAYQARTTLFHKSHDKIAKSLPPETHGKVAAAVFNLGSSTIKAIEQLLSIMKDEGLIVLVVYNDVLDFCRNLDQQAARVLTYGFINQQNDPPFIVAIEKKA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4POO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20911 for 408 contacts (-51.3/contact) +
2D Compatibility (PS) -7417 + (NN) -3222 + (LL) 10924
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -26626.0 ( -65.26 by residue)
QMean score : 0.408
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