Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDLKTMMLNFGPQHPAAHGVLRLVLEMDGEIIERADPHIGLLHRGTEKLIEHKTYLQALPYFDRLDYVSPMSQEHAYSLCVEKLLQCEVPIRAKYLRVLFCELTRILNHLLNISSQALDVGAMTPLLWLFEEREKILEFYERASGARFHAAYIRPGGVAADVPEGLIEDIAKFIEQFPQYIDDVDELLTENRIWKQRTVGISEISIKQALDWGFSGPMLRAAGLAWDLRKSQPYEIYDQLDFDIPVGQNGDCYDRYLVRMEEIRQSVSLVKQCIEKIPEGPVKTEDRKISPPPRTEMKRSMEALIHHFKLYSEGYHVP----EGEAYAAVEAPKG----EFGVYIVSDGTNRPYRCRIRAPGFAHLQALDFMAKGHMLADVAAIIGSLDIVFGEIDR |
| 4W5R Chain:A ((67-166)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRRVNREIVEHMVQHFKTQIF--RKPVFDGRKNLYTAMPLPIGRDKVELEVTLP------IFKVSIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4W5R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38296 for 449 contacts (-85.3/contact) +
2D Compatibility (PS) -9135 + (NN) -3130 + (LL) 21776
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -33935.0 ( -75.58 by residue)
QMean score : 0.164
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