Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPISIKETNADQLPNEKGTRYKE---NKEYFYTSLKNEAIGVVITGLFITAAVMVPSVVGAVIYGIIAVLVVITTILHAIISTLSSYREMEENKVEHVNSQAIKI
1C6W Chain:A ((1-33))
----------GDCLPHLKLCKENKDCCSKKCKRRGTNIEKRCR---------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1C6W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6411 for 148 contacts (43.3/contact) +
2D Compatibility (PS) -3047 + (NN) -544 + (LL) 7372
1D Compatibility (HY) 1600 + (ID) 300
Total energy: 11492.0 ( 77.65 by residue)
QMean score : 0.205
(partial model without unconserved sides chains):
PDB file :
Tito_1C6W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C6W-query.scw
PDB file :
Tito_Scwrl_1C6W.pdb
: