Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENLAYKLIKVTEAAALAAYKLVGLGDEKKADQVAVDAMRTVLNSMEINGTIVIGEGERDKAPMLYVGEKVGTGNGPEIDIAVDPLEGTTICAHYKQSAMSVLAAAKKGDFLHAPDIYMEKIAIGKDLPIGVVSLKNSVEKNFDNLAQAKKCEVNDLTVTILKRERHNNLILKIRKLGARVKLIDDGDIAAIVS--LINGSHDIYIGIGGAPEGVLAAAALSSIGGQMEGRLIFDTH-----------QSKERAKILNIDDLEKIYSIKDMVKGES-VFIATGVTSGELVDGVKFGYNICSTSSLIMLHNK-VIKLQTIQNLC |
| 3BIG Chain:A ((4-326)) | RRELAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIMLNQVNIDGTIVIGEGEIAEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALAVLAVGDKGCFLNAPDMYMEKLIVGPGAK-GTIDLNLPLADNLRNVAAALGKPLSELTVTILAKPRHDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSAAVIRALDGDMNGRLLARHDVKNEENRRIGEQELARCKAMGI-EAGKVLRLGDMARSDNVIFSATGITKGDLLEGISRKGNIATTETLLIRGKSTIRRIQSIHYL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BIG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193953 for 2754 contacts (-70.4/contact) +
2D Compatibility (PS) -33489 + (NN) -15534 + (LL) 184
1D Compatibility (HY) -25600 + (ID) 6800
Total energy: -275192.0 ( -99.92 by residue)
QMean score : 0.607
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