Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSGNVLLTFCSNSGYLRSDMNAVKNLVIWLLIIVITAMFIDSQKDRLRNRFLSTFLPYRGRIQDSRSVEFTKSYDGHFYIQAQVNGHNITFLLDTGATDIVLSQKDALYAGIKLQDIQDFKIYETAKGQIRAGVVQIPQIKIGNFLINDVQASVNTHSMPHSLLGMSFLKYFHFTIRGNKLILYCNSTY
3S45 Chain:A ((11-97))
--------------------------------------------------------------------------------VTAYIEGQPVEVLLDTGA-------DDSIVAGIELGNNYSPKIVGGIGGFINTKEYKNVEIEVLN---KKVRATIMTGDTPINIFGRNILTALGMSLNL-----------
General information:
TITO was launched using:
RESULT:
Template:
3S45.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57426 for 616 contacts (-93.2/contact) +
2D Compatibility (PS) -9017 + (NN) 1155 + (LL) 7392
1D Compatibility (HY) -7200 + (ID) 1250
Total energy: -66346.0 ( -107.70 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_3S45.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S45-query.scw
PDB file :
Tito_Scwrl_3S45.pdb
: