Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFTLPELPYDKTALEPYISAKTLDFHYDKHHKGYLNKLNELIENTDYQNVKIEELIMKVHGNSDEVPVFNNAAQVWNHTFYWNSMKKSGGDKPKEDGLLAKKIQDDIGGFDKFHEEFFNHGIGQFGSGWVWLVLER-GKLKITKTPNADLPLIYDQV-PLLTMDVWEHAYYLDCQNRRIDYIKIFLDHLINWDFAEENLKKNT
2W7W Chain:A ((2-194))
-SFELPALPFAKDALEPHISAETLDYHHGKHHNTYVVKLNGLIPGTEFEGKTLEEIIKTSTGG-----VFNNAAQIWNHTFYWNCLAPNAGGQPT--GAVAAAIDAAFGSFEEFKAKFTDSAINNFGSSWTWLVKNADGSLAIVNTSNAATPLTDEGVTPLLTVDLWEHAYYIDFRNVRPDYMGAFWS-LVNWSFVEENLAK--
General information:
TITO was launched using:
RESULT:
Template:
2W7W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117977 for 1506 contacts (-78.3/contact) +
2D Compatibility (PS) -20094 + (NN) -6111 + (LL) 304
1D Compatibility (HY) -18000 + (ID) 4900
Total energy: -166778.0 ( -110.74 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_2W7W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W7W-query.scw
PDB file :
Tito_Scwrl_2W7W.pdb
: