Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEAYMLASNSTETILVADQNIYNSSASNNPALNTQDLSGSTPDKDKYVTLNSKEEWDKFFKLQNNPSTNITNKV---RTKPHVRKNSNGMYRYTAEENKYNGKEIIGKVAEQIKEEISQKIKSDTMKLVKLKESKNEDNSVKPAIRIVLNDNVKEINMADLLSGSVCKEYNVKAITFCFPDKSNTRGIRCRIDEHGTRIYEVANGSYEMDLRWYCEGKECKIKILMKDDGSIRLIEDNGITEEQLKAHKEIRVGRQYEAKSLHEALALQLPQLQQKCSETTEILSRLADVSTSQAQQVLSAQVSK
3AKF Chain:A ((10-42))--------------------------------------------------------------------TFTNPLAEKRADPHIFKHTDGYYYFTATVPEYDRIVLRRATTLQGLATAPETTIWTKHASGVMGAHIWAPEIHFIDGKWYVYFAAGSTSDVWAIRMYVLESGAANPLTGSWTEKGQIATPVSSFSLDATTFVVNGVRHLAWAQRNPAEDNNTSLFIAKMANPWTISGTPTEISQPTLSWETVGYKVNEGPAVIQHGGKVFLTYSASATDANYCLGMLSASASADLLNAASWTKSSQP


General information:
TITO was launched using:
RESULT:

Template: 3AKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2727 for 108 contacts (25.2/contact) +
2D Compatibility (PS) -3172 + (NN) -601 + (LL) 3144
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -1252.0 ( -11.59 by residue)
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_3AKF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AKF-query.scw
PDB file : Tito_Scwrl_3AKF.pdb: