Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNINIFVFLALSFVTSFNSIQAQILYTWSQVIPDNKLSVRAIIDSNTCPVAYVDGKGVEMLNRSSINNGDHTETICEMIVETGAQNISIDGIQVPILPEKISRIAFIGDTGCRINALFQQECNSVDSWPFKKNLDSIALHEPDLIVHVGDYHYRKTKCRNAQKCGNIYGYNKEAWYADWFEPAKDILLQSSFLFVRGNHENCDRAYEGWFRYLDS-HPFSSEKCENFVPGWFLDIGPMKFFIFDSSSGEDIFTTQSTIDAFEKQF-D-----KLT-QDS-SDKPTWFLTHRPLWRSPKKEFLTLKSHGNLTQIEAFGDKFPNNVATIVS---GHIHIAQILLMNNVPDQIIVGNGGALLHAQDQEPVYQNIEFSYSNGKNYLAHEIKNFFGFGFSILNLDNHEFTFYDQNNEEMYSAKLTEDFKLEIN |
| 1UF3 Chain:A ((3-206)) | --------------------------------------------------------------------------------------------------RTVRYILATSNPMGDLEA-------------LEKFVKLAPDTGADAIALIGNLMPKAAKS-----------RDYA----AFFRILSEA--HLPTAYVPGPQDAPIW--EYLREAANVELVH--PEMRNVHETFTFWRGPYLVAGVGGEIADEG----EPEEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKGLNE------QGSHEVAHLIK---THNPLLVLVAGKGQKHE----MLG-ASWVVVPGDLSEGEYSLLDLRARKLETGNVR---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54450 for 1572 contacts (-34.6/contact) +
2D Compatibility (PS) -20753 + (NN) -9610 + (LL) 13240
1D Compatibility (HY) 400 + (ID) 1300
Total energy: -72473.0 ( -46.10 by residue)
QMean score : 0.330
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