Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TVDIADIRSKSSQELYEILVNLRKEFVNL-IFQKKLGQCNNISRFSLIRKSIARILTVLNERRIEGKSA
1KC8 Chain:W ((5-62))
---VQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD-----
General information:
TITO was launched using:
RESULT:
Template:
1KC8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16674 for 302 contacts (-55.2/contact) +
2D Compatibility (PS) -6092 + (NN) -3293 + (LL) 504
1D Compatibility (HY) 0 + (ID) 950
Total energy: -26505.0 ( -87.76 by residue)
QMean score : 0.773
(partial model without unconserved sides chains):
PDB file :
Tito_1KC8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KC8-query.scw
PDB file :
Tito_Scwrl_1KC8.pdb
: