Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLQSIIKELQDFWIGEGCTILHPYTSE---------VGAGTLHPATIMSAIDVKPT-KIAYLQPVVRP----AD----GRYGDNPNRLYQHHQYQVIIKPSGN-----NLQDVYLSSLRA-LGISTEK------------------------YDIKF---IEDDWENPSVGASGLGWEVTC----------NGMEVTQLTYIQ--QI--GS-INCRIIPGEVAYGLERLAMCIQGVNNVYDI-IWNDNGITYGDIFKQREYELSYLALDYYNTEVVQQQFEDTEKLCKFLIEKELPVAAYDQCVKTSHLLNLLDARGILGVNERTAYIGRVRELTKKCCELYMSK
1YFS Chain:A ((3-244))LSAHEIRELFLSFFEKKGHTRVKSAPLVPENDPTLLFVNAGMVPFKNVFLGLEKRPYKRATSCQKCLRVSGKHNDLEQVGYTS------RHHTFFEMLGNFSFGDYFKKEAIEYAWEFVTEVLKLPKEKLYVSVYKDDEEAYRIWNEHIGIPSERIWRLGEEDNFWQMGDVGPCGPSSEIYVDRGEEYEGDERYLEIWNLVFMQYNRDENGVLTPLPHPNIDTGMGLERIASVLQGKNSNFEIDIIFPLIQFGEEVSGKKYGEKFETDVALRVIADHLRAITFAISDGVIPSNEGRGYVIRRILRRAMRFGYKLGIENPFLYKGVDLVVDIMKEPYPELELSREFV


General information:
TITO was launched using:
RESULT:

Template: 1YFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88815 for 1251 contacts (-71.0/contact) +
2D Compatibility (PS) -18855 + (NN) -4007 + (LL) -100
1D Compatibility (HY) -6000 + (ID) 1850
Total energy: -119627.0 ( -95.63 by residue)
QMean score : 0.355

(partial model without unconserved sides chains):
PDB file : Tito_1YFS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YFS-query.scw
PDB file : Tito_Scwrl_1YFS.pdb: