Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------MIHVAIYMLLLCMSAMLYRIAKLSDIYNK-ALAFNHFSTQVILLITAVSIILDSFFLVDIALLYASVSFIST-------IALMRLMLL
2F6M Chain:B ((3-109))
MDISQLFHDEVPLFDNSITSKDKEVIETLSEIYSIVITLDHVEKAYLKDSIDDTQYTNTVDKLLKQFKVYLNSQNKEEINKHFQSIEAFADTYNITASNAITRLERG
General information:
TITO was launched using:
RESULT:
Template:
2F6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86752 for 469 contacts (-185.0/contact) +
2D Compatibility (PS) -8400 + (NN) -6825 + (LL) 0
1D Compatibility (HY) -800 + (ID) 600
Total energy: -103377.0 ( -220.42 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_2F6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F6M-query.scw
PDB file :
Tito_Scwrl_2F6M.pdb
: