Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFIQIEETPNPNTLKFLPGFAILNERETADFSNPDEIKNSKLAADLFQIEHVIRVFFGHDFISVTKSDGISWDILKVEILTTVMDHFTSGGKALDRKGVNDNNIPDEEFFDENDIEIVNRIKELMENYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLCYHIPEVSGIETTL
1PQX Chain:A ((2-86))
KIISISETPNHNTMKITLSESREGMT-SDTYTKVDD-SQPAFINDILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFELEHHHHHH--------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1PQX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39512 for 547 contacts (-72.2/contact) +
2D Compatibility (PS) -9203 + (NN) -5327 + (LL) 5056
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -52836.0 ( -96.59 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_1PQX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PQX-query.scw
PDB file :
Tito_Scwrl_1PQX.pdb
: