Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLIPKVSLCINGSTNLTQYITEVRKFPMLSQEEEVRLAKSWNQCKDISSAHKLITSHLNLVVKIAMKFKNYGLLLMDLIMEGNMGLIHAVKKFNPDLGFRFSTYAVWWIEASIKDFILKSWSFVKIGTTQAQRRLFFSLRKIKKRILQYTNRETLNNEEIKAISNELSVSEGDVIQMNYRLACKDQSLNNCIKVGGDSKKELQDMIPCNSVNQEVTYQNREEKELKETILNNALASLNERSRDIFISRY-LSENTQ-TLDELSKKYCVSRERIRQLAEQAMSKVKQHIQSESLKFSLHA |
4YFK Chain:F ((366-608)) | ---------------------------------------SIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIE--TINKLNRISRQMLQEMGREPTPEE----LAERMLMPE-DKIRKVLKIAKEPISMETPI--GDDEDSHLGDFIEDTTL--ELPLDSATTESLRAAT-HDVLAGLTAREAKVLRMRFGIDMNTDYTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YFK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82544 for 1431 contacts (-57.7/contact) +
2D Compatibility (PS) -25683 + (NN) -10958 + (LL) 4564
1D Compatibility (HY) -15600 + (ID) 3900
Total energy: -134121.0 ( -93.73 by residue)
QMean score : 0.609
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