Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVFGLHHFNYTLKKNKNDVAKALFEYGAKIDVDYVEERLIISGTTEYSQSTVEILLPYASI
1TM9 Chain:A ((100-136))VIYFLYHFGFLKDNNKKQIIKKAYETIADNIADYLNEN-----------------------


General information:
TITO was launched using:
RESULT:

Template: 1TM9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4447 for 181 contacts (-24.6/contact) +
2D Compatibility (PS) -3744 + (NN) -1269 + (LL) 1820
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -10190.0 ( -56.30 by residue)
QMean score : 0.256

(partial model without unconserved sides chains):
PDB file : Tito_1TM9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TM9-query.scw
PDB file : Tito_Scwrl_1TM9.pdb: