Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVILKENIRTLGKLGEIVKVKPGYARNFLFPQRKAVKATKESIAKLEEQRSFLEEENIRKLNLASELAASFAGKFVILVKQASEDGKIFGSVTTREVARSLSQEYEVDHRKISFNGVKIRNLGEYQASIEFHSEIVVQVAVHVVRSETDAHELRQVKSQSQKSQQQEAKQNEVGEATDSDKADQK
1CQU Chain:A ((1-51))
MKVIFLKDVKGKGKKGEIKNVADGYANNFLFKQGLAIEATPANLKALEAQKQKEQR----------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1CQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25900 for 339 contacts (-76.4/contact) +
2D Compatibility (PS) -5004 + (NN) 2592 + (LL) 10496
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -22966.0 ( -67.75 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_1CQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CQU-query.scw
PDB file :
Tito_Scwrl_1CQU.pdb
: