Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNYRFGTKVLIIGSGAAGYAAAIYAARANLEPVVV--TGMQPGGQLTITMGVENYPGFVSI-QGPELMKQMRLHVEKVGAEIVNDEIKSVEQLEYSNEYKFRSSGNNDDYYSNAVIIAAGSQAKWLGLESERKFQGYGVSACATCDGAFFRNKIVAVIGGGNTAVEEAIFLTRFAKEVILIHRRDKLRAEKIMQDRLFANNKIKVIWNHTVEQVLGEENPKKVTGITIKSTKIDEIQELRVNGVFIAIGHAPNTGVFKS-----FIEMDEQGYIITKPGTTLTSRAGVFAAGDVQDKVYRQAVVAAGTGCMAALDAEKFLECTSK |
| 2Q0K Chain:A ((6-309)) | -----------IIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFG---LKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAKNNDKIEFLTPYVVEEIKGDAS--GVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDF-SMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEH--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224256 for 2533 contacts (-88.5/contact) +
2D Compatibility (PS) -32439 + (NN) -16056 + (LL) 1232
1D Compatibility (HY) -21200 + (ID) 5750
Total energy: -298469.0 ( -117.83 by residue)
QMean score : 0.458
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