Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKALITCFIFLVCSFTRSYASDDVHLEKSETELYEEAVELFDQKKYKQAIRAFRKIEDLYPFSYWAMKAKLLSGISHYNMDDYSSAASDMDDYIYIYPNGEDLPYVYYLRVLSYYMQINRVQLGQQTAYKALELAAEYVNLFSESEYIEEMKEKVRLITDHILKKEYSIGKFYFRRGEYLAAIKRFQNII-SSKDYSYFPRSINYLIAAYSALGLDLEAGQYESLLAENLKENTVEQ |
| 3VTX Chain:A ((5-176)) | ------------------------------TTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN---VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTS---AEAYYILGSANFMID--------EKQAAIDALQRAIALNTVYA-----------------DAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGF---IRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKAKYE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VTX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56276 for 1345 contacts (-41.8/contact) +
2D Compatibility (PS) -18451 + (NN) -9198 + (LL) 6108
1D Compatibility (HY) -1600 + (ID) 1600
Total energy: -81017.0 ( -60.24 by residue)
QMean score : 0.533
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