Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNQVIKHKKKDFSLAFKNKLALSNLFYRGLYISLYAIKERAPEKHVDIIRVGIVISKKAGKATKRNKIKRRLRVLARTNILDISNIGY-YYIILTHKNIMQASYKNLRKDITICLKKIK
4CJN Chain:A ((124-172))
----------------------------------------------------------------------ERGKILDRNNV-ELANTGTAYEIGIVPKNVSKKDYKAIAKELSISEDYIK
General information:
TITO was launched using:
RESULT:
Template:
4CJN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10694 for 198 contacts (-54.0/contact) +
2D Compatibility (PS) -4907 + (NN) 149 + (LL) 5944
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -12308.0 ( -62.16 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_4CJN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CJN-query.scw
PDB file :
Tito_Scwrl_4CJN.pdb
: