Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQKKTFTIIDGYGFLFGAYYVLHHLTTTTGMPIGAVYGFLNMVLKYITHSDYLTIALDSGKKNFRHDLYPEYKANRVTPPEGLIPQFTILREAIEAFNLSYEEIEGYEADDIIATLTAKYANHQDLKVVIISSDKDLFQLLNYDVLIFDPIKNIYIDEKQVIEKFGVNSNKLLDLFSLTGDVSDNIPGVPGIGPKTAAKLLDRFNSLNNTIENINNIKQTRTRNILTEHKEKALISRKLLSLCEKVDLQHDVIKYKVLSPNMEKLLSFLKKYEFNSLIGKVEKLFSYNESSTKERTEYSSEALEKFLECCRYEGKVAIHCHFENNVLSKISLSYNEDNIFYIDQNRSQDALITINSALFSNGILKIIHDTRETRKTIPTIEKVLGSVDDLMIMSYSLDTGKHDHSIPNIIAHNLSENVETFSAKTLIAIHEKLKQRLF-----KEKLFTIYERFDKPLMKVIFNMEKNGILLNIHKLQELSDKFQQLIAVLENDIYNLAGEKFNIASPKQLSDVLFNKMGLNK-KKKLKSGSYSTNSVVLEELEIEGVEIASKILDWRHLSKLKSTYTDALIKQVDPLDGRIHTNFSTTVTATGRLSSSSPNLQNIPIRSKEGNLIRQTFIAPKGYKIISADYSQIELRLLAHVANVTAFKEAFANGKDIHGITAGQVFGVQKDMEVDEQLRRKAKSINFGIMYGISQFGLAKRLGITIEEAAEYINYYFSCYPEIKVYMEKVVSTARQHGYVETLFGRRCFVKDINNTIPYLRQFAERAAINAPLQGTAADIIKCAMIQLFDQLK--AGKIILQVHDELLVEVENEKVQETAKLMKDVMENIVKISIPLEVEVKISDNWGTTTQTL |
3RRG Chain:A ((79-535)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDPMLLAYLLDP---SNTTPEGVARRYGGEW-TEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALR-EAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPRE-----LMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRLEEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241940 for 3478 contacts (-69.6/contact) +
2D Compatibility (PS) -47986 + (NN) -18698 + (LL) 27564
1D Compatibility (HY) -40800 + (ID) 9900
Total energy: -331760.0 ( -95.39 by residue)
QMean score : 0.518
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