Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------MLPATPDNSTAVAIIPIAAILGIIPIATSVAPIAPNNNAK-----PIVHPPEKVLEGCCFCEEIMLVYYKTVARCFVF--------CANYYYFHHLQTFFEME---LYYL-----
4MI7 Chain:A ((6-139))
GIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSSE-----CLHAECIVGYDSEVKKVLIYDSNTSPEWQSNIDVYDKLTLAFNCSICGLYYDGVYEP
General information:
TITO was launched using:
RESULT:
Template:
4MI7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63942 for 560 contacts (-114.2/contact) +
2D Compatibility (PS) -9065 + (NN) 4910 + (LL) 356
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -71641.0 ( -127.93 by residue)
QMean score : 0.071
(partial model without unconserved sides chains):
PDB file :
Tito_4MI7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MI7-query.scw
PDB file :
Tito_Scwrl_4MI7.pdb
: