Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEYQGVNTVKKDRKPITITANAVERIRYLLDQKQYTNLERSEEAIGIRVLIKQKGCSGLKYDIEYAYDIHPLESVIEESCSDGQKVKVLIDPKSVMFILGSEMDYVEEKFSSGFVFKNPNEKGKCGCGESFHV
1R94 Chain:A ((1-97))
--------------MSITLSDSAAARVNTFLANR--------GKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFED-----KGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKD----------
General information:
TITO was launched using:
RESULT:
Template:
1R94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47249 for 628 contacts (-75.2/contact) +
2D Compatibility (PS) -10624 + (NN) -4318 + (LL) 1396
1D Compatibility (HY) -8000 + (ID) 1700
Total energy: -70495.0 ( -112.25 by residue)
QMean score : 0.657
(partial model without unconserved sides chains):
PDB file :
Tito_1R94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R94-query.scw
PDB file :
Tito_Scwrl_1R94.pdb
: