Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPISLPKVRGIYRYSVLMSKITWLNVGGQADILFKPRDIEDLIYLIK--N-TKLPISVIGATSNMIVRDSGIRGITVKLGKEFAYIKYK----SNNSIIAGGAALLSNLAYFAGEQQVSGLEFLVGIPGTIGGGIEMNAGAYGSDVASVVQSIKAVNLS-DGNLYEFSSKEMGYVYRGHSLKG----QWIFIEAEFKGVSSGH------------EV-I-LHRLKEIINKKNKSQP--VRGKTAGCIFKNPRA-------------------------YQAWKLIDGSGCRGLNNGGAKISKKHCNFLLNYNNATASDLENLGNKVRNTVKDKFNIELEWEIRVLGSH |
| 3I99 Chain:A ((9-344)) | -------TTMQIQLGANLKPYHTFGIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTC-HYTGMIVVNR--LN-GIEHQQDDDYHRLHVAGGEDWPSLVSWCVEQGIGGLENLALIPGCAGSAPIQNIGAYGVEFKDVCDYVEYL-CLETGTVKRLTMEECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQPIIQYGPLKDLSSDCAIHDVYQRVCATRMEKLPDPAVMGNAGSFFKNPVISQQAFARLQIEHPDVVAYPAEQGVKVAAGWLIDQAGLKGHQIGGAKVHPKQALVIVNTGDASAQDVLMLAADIQQRVFNCYGIELEHEVRFIGES |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151482 for 2318 contacts (-65.4/contact) +
2D Compatibility (PS) -29878 + (NN) -1320 + (LL) 496
1D Compatibility (HY) -13600 + (ID) 3500
Total energy: -199284.0 ( -85.97 by residue)
QMean score : 0.446
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