Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------MITLDGRLVAHKHINVNKGELAHRHSTLAGGKPVLCPVLKVEKGKITYIGNNSEHYKPALANLYNAVKN--------------------------------------------------------------- |
| 1JYT Chain:A ((1-163)) | MAEDGPQKQQLDMPLVLDQDLTKQMRLRVESLKQRGEKKQDGEKLLRPAESVYRLDFIQQQKLQFDHWNVVLDKP----------GKVTITGT-SQNWTPDLTNLMTRQLLDPAAIFWRKEDSDAMDWNEADALEFGERLSDLAKIRKVMYFLITFGEGVEPANLKASVVFNQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2619 for 219 contacts (-12.0/contact) +
2D Compatibility (PS) -5985 + (NN) 24 + (LL) 996
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -9484.0 ( -43.31 by residue)
QMean score : 0.251
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