Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITHMNMLILILLCGIVTLLIRIIPFIMISKVQLPDVVVRWLSFIPITLFTALVIDSIIQQTPHGEGYTLNIPYIIALIPTVILSIITRSLTITIISGIVIMATLRFFF
1CKK Chain:B ((1-26))
-----------------------------------------VKLIP-SWTTVILVKSMLRKRSFGNPF-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1CKK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1923 for 98 contacts (-19.6/contact) +
2D Compatibility (PS) -2514 + (NN) 305 + (LL) 9896
1D Compatibility (HY) -3600 + (ID) 250
Total energy: 1914.0 ( 19.53 by residue)
QMean score : -0.039
(partial model without unconserved sides chains):
PDB file :
Tito_1CKK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CKK-query.scw
PDB file :
Tito_Scwrl_1CKK.pdb
: