Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWLKQLQSLHTKLVIVYVLLIIIGMQIIGLYFTNNLEKELLDNFKKNITQYAKQLEISIEKVYDEKGSVNAQKDIQNLLSEYANRQEIGEIRFIDKDQIIIATTKQSNRSLINQKANDSSVQKALSLGQSNDHLILKDYGGGKDRVWVYNIPVKVDKKVIGNIYIESKINDVYNQLNNINQIFIVGTAISLLITVILGFFIARTITKPITDMRNQTVEMSRGNYTQRVKIYGNDEIGELALAFNNLSKRVQEAQANTESEKRRLDSVITHMSDGIIATDRRGRIRIVNDMALKMLGMAKEDIIGYYMLSVLSLEDEFKL-EEIQENNDSFLLDLNEEEGLIARVNFSTIVQ-ETGFVTGYIAVLHDVTEQQQVERERR---------EFVANVSHELRTPLTSMNSYIEALEEGAWKDEELAPQFLSVTREETERMIRLVNDLLQLSKMDNESDQINKEIIDFNMF-INKIIN------RHEMSAKDTTFIRDIPKKTIFTEFDPDKMTQVFDNVITNAMKYSRGDKRVEFHVKQNPLYNRMTIRIKDNGIGIPINKVDKIFDRFYRVDKARTRKMGGTGLGLAISKEIVE-AHNGRIWANSVEGQGTSIFITLPCEVIEDGDWDE |
| 3A0R Chain:A ((11-340)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESILESLETAIITLSKDGRITEWNKKAEQLFGLKKENVLGRRLKDLPDFEEIGSVAESVFENKEPVFLNFYKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKRRERLSILGEMTARVAHEIRNPITIIGGFIMRMKK-HLDDPETLKKYINIITNELSRLETIVKEILEYSK--------ER-VLEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIK--ITSEDMYTKVRVSVWNSGPPIPEELKEKIFSPFF------TT------LGLSICRKIIEDEHGGKIWTENRENGVVFIF--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3A0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -72412 for 2023 contacts (-35.8/contact) +
2D Compatibility (PS) -31648 + (NN) -5228 + (LL) 22436
1D Compatibility (HY) -26000 + (ID) 4000
Total energy: -116852.0 ( -57.76 by residue)
QMean score : 0.353
|
|
|