Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVCMCFKVLKTLKIGCTEKPHLLKL-----------------------------------------
4O66 Chain:A ((10-76))
FLRGACIKTGDRFRVKIGYNQELIAVFKSLPSRHYDSFTKTWDFSMSDYRALMKAVERLSTVSLKPL
General information:
TITO was launched using:
RESULT:
Template:
4O66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4046 for 98 contacts (-41.3/contact) +
2D Compatibility (PS) -2800 + (NN) 1611 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -7435.0 ( -75.87 by residue)
QMean score : 0.245
(partial model without unconserved sides chains):
PDB file :
Tito_4O66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O66-query.scw
PDB file :
Tito_Scwrl_4O66.pdb
: