Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------MSTFKPLPIFILSVLSSLPKARLSKNKI-------FIVFRFSSVTDKTTQNKKDTREVSRIFYSAIA-----PDC
1IMO Chain:A ((835-922))
GSADETLCQTKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQEFDMTSATHVLGSRDKNPAAQQVSPEWIWACIRKRRLVAPC
General information:
TITO was launched using:
RESULT:
Template:
1IMO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13859 for 431 contacts (-32.2/contact) +
2D Compatibility (PS) -6261 + (NN) 516 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 350
Total energy: -23154.0 ( -53.72 by residue)
QMean score : 0.207
(partial model without unconserved sides chains):
PDB file :
Tito_1IMO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IMO-query.scw
PDB file :
Tito_Scwrl_1IMO.pdb
: